Increase Your Library Preparation Throughput with Over 85 Automated Protocols

75 Plus Reasons Why You’ll Like Our Walk Away NGS Library Prep

We have developed over 85 library prep automation protocols for the Sciclone® G3, Zephyr® G3 and JANUS® G3 NGS automated workstations. Our expert applications team can assist with support and training. Learn more about each workstation by clicking here.

Fast and Easy Library Prep Methods for Your NGS Workflow PLATFORMS
Sciclone® JANUS® Zephyr®
DNA Library Preparation Kits 10XGenomics Genomic Preparation √*
ArcherDx Universal DNA Reagent Kit v2 √*
Bioo Scientific NEXTflex® Rapid DNA-Seq Kit
Bioo Scientific NEXTflex® Cell-Free DNA-Seq Kit
Bioo Scientific NEXTflex® Rapid XP DNA-Seq Bundle
Illumina Nextera®
Illumina Nextera® XT DNA
Illumina TruSeq® DNA PCR-Free
Illumina TruSeq® Nano DNA
KAPA Biosystems DNA HTP Library preparation
KAPA Biosystems DNA Hyper Prep™
KAPA Biosystems DNA HyperPlus™
New England BioLabs Inc. NEBNext® Fast DNA Library Prep for Ion Torrent Instruments √*
New England BioLabs Inc. NEBNext® Ultra™ II DNA Library Prep for Illumina® Instruments
New England BioLabs Inc. NEBNext® Ultra™ DNA
New England BioLabs Inc. NEBNext® dsDNA Fragmentase™
NuGen Ovation® Ultralow DR Multiplex System (1-96)
Pacific BioSciences 2kb Template Preparation & Sequencing
Pacific BioSciences 10kb Template Preparation & Sequencing
Pacific BioSciences 20kb Template Preparation & Sequcing
Pacific BioSciences Greater than 10kb Template Preparation Using AMPure PB Beads
Thermo Fisher Ion Torrent™ Ion Express® Fragment Library Prep
Thermo Fisher Ion Express® Plus gDNA Fragment Library Prep √*
Qiagen GeneRead® Library I Core Kit √*
Qiagen QIAseq® FX DNA Library Kit
Swift Biosciences Accel-NGS® 2S Plus DNA Library Kit √*
RNA Library Preparation Kits Agilent Technologies SureSelect® Strand-Specific RNA Library Prep
Bioo Scientific NEXTflex® Rapid RNA-Seq Kit
Bioo Scientific NEXTflex® Rapid Directional RNA-Seq Kit
Bioo Scientific NEXTflex® Rapid Directional qRNA-Seq Kit
Bioo Scientific NEXTflex® Small RNA-Seq Kit v2
Bioo Scientific NEXTflex® Small RNA-Seq Kit v3 √*
Illumina TruSeq® RNA v2
Illumina TruSeq® RNA Access
Illumina TruSeq® Small RNA
Illumina TruSeq® Stranded mRNA (poly-A selection)
Illumina TruSeq® Stranded Total RNA (Ribozero™) √*
llumina/Epicentre Ribozero™/Scriptseq Stranded RNA
KAPA Biosystems mRNA HyperPrep™
KAPA Biosystems RNA HyperPrep™
KAPA Biosystems RNA HyperPrep™ with RiboErase™
KAPA Biosystems Stranded RNA-Seq
KAPA Biosystems Stranded RNA-Seq with RiboErase™
KAPA Biosystems Stranded mRNA-Seq
Lexogen autoSENSE mRNA-Seq Library Prep Kit for Illumina®
Lexogen autoQuantSeq 3'mRNA-Seq Library Prep kit for Illumina®
New England BioLabs Inc. NEBNext® Ultra™ RNA Library Prep Kit for Illumina® √*
New England BioLabs Inc. NEBNext® Ultra™ RNA II Library Prep Kit for Illumina® √*
NuGen Ovation® Human Blood RNA-Seq Library Systems
NuGen Ovation® Human FFPE RNA-Seq Multiplex System
NuGen Ovation® RNA-Seq Single-Cell System √*
NuGen Ovation® RNA-Seq System v2
NuGen Ovation® Universal RNA-Seq System (strand-specific)
Takara formerly Clontech SMARTer® Stranded Total RNA-Seq Kit v2 - Pico Input Mammalian
Takara formerly Clontech SMART-Seq® v4 Ultra® Low Input RNA Kit for Sequencing √*
Thermo Fisher (Ion Torrent™) Ion Total RNA Kit v2
Exome/Target Capture Kits 10XGenomics Exome Preparation
Agilent Technologies HaloPlex® √*
Agilent Technologies SureSelect® XT2 Δ
Agilent Technologies SureSelect® XT Δ
Agilent Technologies SureSelect® QXT √*
Cergentis TLA Targeted Locus Amplification √*
IDT XGen® Exome Capture
Illumina Nextera® Rapid Capture
Illumina TruSeq® Rapid Exome
Illumina TruSeq® Custom Amplicon v1.5
Illumina TruSeq® Custom Amplicon Low Input
Illumina TruSeq® Exome
Illumina TruSight® Cancer
Illumina TruSight® Enrichment
Illumina TruSight® Rapid Capture
Illumina TruSight® Tumor
Illumina TruSight® Tumor 15
NuGen Ovation® Target Enrichment System
Roche SeqCap EZ
Roche SeqCap EZ HyperCap √*
Thermo Fisher Ion TargetSeq Exome
Thermo Fisher Ion Torrent® Ampliseq Panels √*
RNA Microarray Kits NuGen Encore® Biotin Module
NuGen Ovation® FFPE WTA System
NuGen Ovation® Pico WTA System v2
Metagenomics Kits Bioo Scientific NEXTflex® V5-V6 Amplicon-Seq Kit
Bioo Scientific NEXTflex® 16S Amplicon Seq Kit 2.0
Bioo Scientific NEXTflex® 16S V1 V3 Amplicon Seq
Bioo Scientific NEXTflex® 18S ITS Amplicon Seq
NuGen Ovation® Ultraflow Methyl-Seq Library System
Supplementary Applications and Protocols Beckman Coulter SPRI® Purification
Beckman Coulter SPRI® Size Selection
Bioo Scientifc NEXTflex® Poly(A) Bead Selection
KAPA Biosystems SYBR® FAST qPCR Kit
KAPA Biosystems Library Quant
KAPA Biosystems hgDNA Quantification and QC
PerkinElmer Normalization & Pooling
Thermo Fisher PicoGreen® Quantitation


√ Developed
√* In Progress
Δ JANUS G3 NGS Express Workstation protocols for hybridization & capture chemistries only include the library prep portion

For research use only. Not for use in diagnostic procedures.

Want fast and easy setup for sequencing workflows?

PerkinElmer offers over 85 library prep automation protocols to simplify the automation of your NGS workflows.